Vulnerabilities in pkg:pypi/pypop-genomics

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Advisory Summary

GHSA-p4m5-32pr-2hqr is a LOW missing arguments and redundant null vulnerability (General Security Weakness) affecting Pypop genomics libraries in the PyPI ecosystem. The issue involves missing arguments and redundant null pointers. Remediation is available by upgrading affected packages to version 1.0.2.

1 Known Advisory Record(s)
Package Vulnerability Intelligence

pkg:pypi/pypop-genomics

1 Known Advisory Record(s)

Vulnerability advisories affecting package pkg:pypi/pypop-genomics. Select an advisory below to view technical details or fixes.

Advisory ID CVE / NVD Severity Summary
GHSA-p4m5-32pr-2hqr - LOW PyPop C extensions possible vulnerability: missing arguments and redundant null pointers

GHSA-p4m5-32pr-2hqr at a Glance

CVE Identifier N/A
GHSA Identifier GHSA-p4m5-32pr-2hqr
Severity LOW
CVSS v3.1 Base Score N/A
CWE Classification General Security Weakness
Affected Product Pypop genomics
Package Ecosystem PyPI
Published Date
Last Updated

How to Fix GHSA-p4m5-32pr-2hqr

To remediate this vulnerability, upgrade all affected Pypop genomics dependencies to a patched release. Both direct and transitive dependencies should be checked, as frameworks or security libraries may pull in vulnerable versions transitively.

pypop-genomics fixed: 1.0.2 
pip install pypop-genomics>=1.0.2
Verify Direct and Transitive Dependencies

Run the following command in your project directory to verify that all resolved dependencies use the patched release: 

pip show pypop-genomics

How to Check if You Are Affected

To determine whether your Python environment is affected by GHSA-p4m5-32pr-2hqr, inspect your installed packages using pip:

pip show pypop-genomics

Analyze the terminal output to locate any version of Pypop genomics in your dependency tree. If any resolved version matches the vulnerable ranges listed in the table below (for example, versions earlier than 1.0.2), your application is affected.

Note: The pip show pypop-genomics command checks currently installed packages in your active Python environment.

Technical Details

Vulnerability Mechanism & Technical Analysis

This vulnerability is classified under General Security Weakness. In Pypop genomics, software state validation or input boundaries are circumvented during processing. Review the official source advisory statement below for specific affected components, classes, and reproduction details.

Source Advisory Statement

### Impact Code scanning revealed possible vulnerability in C extensions for PyPop: incorrect function calls (missing arguments or wrongly typed arguments) and redundant null pointers. ### Patches The problem has been patched and fixed in the latest release of PyPop: 1.0.2. Please upgrade your PyPop installation via: ``` pip install -U pypop-genomics ``` ### Workarounds No. Upgrade to the latest package: 1.0.2. ### References N/A

GHSA-p4m5-32pr-2hqr Affected Pypop genomics Versions

1 component(s)
Fixed Versions:
1.0.2
Product / Package Ecosystem Affected Versions Fixed Version
pypop-genomics
pypi/pypop-genomics
PyPI
< 1.0.2
1.0.2

References

GitHub Advisory / Wiki ADVISORY
https://github.com/alexlancaster/pypop/security/advisories/GHSA-p4m5-32pr-2hqr
Security Fix Commit FIX COMMIT
https://github.com/alexlancaster/pypop/commit/2e5c495dd7684f67f6682e80e324351039a28262
Pypop genomics Source Repository REPOSITORY
https://github.com/alexlancaster/pypop
Pypop genomics Release RELEASE
https://github.com/alexlancaster/pypop/releases/tag/v1.0.2

Frequently Asked Questions

What is GHSA-p4m5-32pr-2hqr?
GHSA-p4m5-32pr-2hqr is a security vulnerability in Pypop genomics involving missing arguments and redundant null pointers under General Security Weakness.
Which Pypop genomics versions are affected?
Affected versions include releases prior to 1.0.2 across affected packages: pypop-genomics.
What version fixes GHSA-p4m5-32pr-2hqr?
Upgrading to 1.0.2 (or the latest patched release for your respective branch) resolves the vulnerability.
Is pypop-genomics affected?
Yes, pypop-genomics is affected in releases prior to 1.0.2. Upgrade your dependency to 1.0.2 or later.
What CWE is associated with GHSA-p4m5-32pr-2hqr?
GHSA-p4m5-32pr-2hqr is classified under General Security Weakness.
How can I check PyPI dependencies for GHSA-p4m5-32pr-2hqr?
Run the dependency tree command: 'pip show pypop-genomics'. This command lists direct and transitive dependencies in your build configuration so you can verify if a vulnerable version is resolved.
Machine-readable OSV JSON OSV v1.5 Schema
Normalized schema output
View Raw JSON 
{
  "schema_version" : "1.4.0",
  "id" : "GHSA-p4m5-32pr-2hqr",
  "modified" : "2024-02-26T20:04:19Z",
  "published" : "2024-02-26T20:04:19Z",
  "aliases" : [ ],
  "summary" : "PyPop C extensions possible vulnerability: missing arguments and redundant null pointers",
  "details" : "### Impact\nCode scanning revealed possible vulnerability in C extensions for PyPop: incorrect function calls (missing arguments or wrongly typed arguments) and redundant null pointers.\n\n### Patches\nThe problem has been patched and fixed in the latest release of PyPop: 1.0.2. Please upgrade your PyPop installation via:\n\n```\npip install -U pypop-genomics\n```\n\n### Workarounds\nNo. Upgrade to the latest package: 1.0.2.\n\n### References\nN/A\n",
  "severity" : [ ],
  "affected" : [ {
    "package" : {
      "ecosystem" : "PyPI",
      "name" : "pypop-genomics"
    },
    "ranges" : [ {
      "type" : "ECOSYSTEM",
      "events" : [ {
        "introduced" : "0"
      }, {
        "fixed" : "1.0.2"
      } ]
    } ]
  } ],
  "references" : [ {
    "type" : "WEB",
    "url" : "https://github.com/alexlancaster/pypop/security/advisories/GHSA-p4m5-32pr-2hqr"
  }, {
    "type" : "WEB",
    "url" : "https://github.com/alexlancaster/pypop/commit/2e5c495dd7684f67f6682e80e324351039a28262"
  }, {
    "type" : "PACKAGE",
    "url" : "https://github.com/alexlancaster/pypop"
  }, {
    "type" : "WEB",
    "url" : "https://github.com/alexlancaster/pypop/releases/tag/v1.0.2"
  } ],
  "database_specific" : {
    "cwe_ids" : [ ],
    "severity" : "LOW",
    "github_reviewed" : true,
    "github_reviewed_at" : "2024-02-26T20:04:19Z",
    "nvd_published_at" : null
  }
}